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Chemistry Partner Application
Sigma's Automated Protocol for Extract-N-Amp* Plant PCR* Kits
on the Biomek® FX
Sigma-Aldrich Corporation – www.sigmaaldrich.com
| The Extract-N-Amp Plant PCR Kits (Product Codes XNAR, XNAPR,
and XNAPRG) have been developed for use as a high-throughput system
for the rapid extraction and subsequent amplification of genomic
DNA from various plant leaves in a 96-well format. The Extract-N-Amp
Plant PCR Kits provide a novel extraction system that eliminates
the need for long enzymatic digestions and homogenization steps
that are not amenable to automation. The XNAR Kit includes a specially
formulated Extract-N-Amp PCR ReadyMix* reagent that is a 2x reaction
mixture of buffer, salts, dNTPs, and Taq polymerase. The ReadyMix
reagent also contains Sigma’s antibody mediated hot start mechanism,
JumpStart* Taq polymerase, for highly specific amplification of
genomic DNA directly from the extract. The XNAPR Kit includes the
REDExtract-N-Amp* PCR ReadyMix reagent containing an inert tracking
dye for convenient direct loading of PCR reactions onto agarose
gels for analysis. The XNAPRG Kit includes a SYBR* Green Extract-N-Amp
PCR ReadyMix reagent for real-time quantitative analysis of the
amplified PCR products.
The validated method created for use on the Biomek® FX Liquid Handling
Workstation provides a walk-away protocol for all aspects of the
Extract-N-Amp Plant PCR Kits.
Extraction and amplification of genomic DNA from plant leaves is
accomplished in 4 easy steps:
1. The Extraction Solution is added to a
piece of leaf tissue.
2. Extracts are incubated for 10 minutes
at 85 °C.
3. The Dilution Solution is added to the
extract. Extracts are now stable for at least 6 months if
stored at 2-8 °C.
4. PCR reactions are set up using 4 µl of
the extracts.
In just 20 minutes, the Biomek FX can complete extraction and PCR
reaction setup for 96 leaf tissue samples.
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* All trademarks are the property of their respective owners. Where
applicable, the PCR process is covered by patents owned by Roche Molecular
Systems, Inc., and F. Hoffman-LaRoche, Ltd.
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